Measuring CFU on a spreadplate with a scanner
Measuring CFU on a spreadplate with a scanner
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speedy_thrills

Original Poster:

7,968 posts

273 months

Thursday 11th September 2008
quotequote all
Is there any software available that will measure the number of CFU on a cultured spread or pour plate using a scanner or digital camera? It occured to me today that you can scan text surely this should be easy and every lab in the world could save a few grand?


GreenV8S

31,027 posts

314 months

Thursday 11th September 2008
quotequote all
speedy_thrills said:
It occured to me today that you can scan text surely this should be easy and every lab in the world could save a few grand?
I would assume these days that how it's done. It's extremely simple in computing terms. Surely you don't still have humans looking at them?

ad551

1,502 posts

243 months

Thursday 11th September 2008
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Hmmm.

537?

trooperiziz

9,457 posts

282 months

Thursday 11th September 2008
quotequote all
speedy_thrills said:
Is there any software available that will measure the number of CFU on a cultured spread or pour plate using a scanner or digital camera? It occured to me today that you can scan text surely this should be easy and every lab in the world could save a few grand?
The software that analyses gel plates will easily be able to do it, for example

http://www.nonlinear.com/products/progenesis/sames...

unfortunately, this software is massively expensive (because it is built to do much more than just spot counting) unless you buy a plate scanner which will usually get you some software for free. You do have a 7 figure research budget to play with, don't you? wink

I don't know of any cheap way of doing it, but it is actually quite a difficult problem to solve, what is obvious to the human eye and brain is actually very tricky to reliably reproduce in software form. There may be something out there though...

rhinochopig

17,932 posts

228 months

Thursday 11th September 2008
quotequote all
It's very easy technically, BUT, I think there is a legal issue with it. It is difficult to prove the reliability of the software (google SIL levels) so a lot of places will not consider using it for fear of litigation. A chap I used to row with at Uni built a vision recog system that was more accurate than doctors at diagnosing melanoma, but as I recall it died a death for the same reasons.

HTH